Showing posts with label bluefin. Show all posts
Showing posts with label bluefin. Show all posts

Tuesday, June 6, 2017

Featured Scientist: Michael Landry

As we wrap up this year's survey, the first of two annual research surveys in the Gulf of Mexico for the NOAA RESTORE Act Science Program, we'd like you to get to know the PI from Scripps Institution of Oceanography, Professor Mike Landry! Read on as he describes his research and our cruise goals in his own words!

"I am a biological oceanographer. I have been on many ocean research expeditions over the years (since the 1970s), but never on a cruise in the Gulf of Mexico, never on a NOAA ship and never with fisheries scientists trying to understand a specific fisheries-related problem. So this particular cruise is special and a new learning experience in many respects. At the same time, it is also familiar. What we have investigated on past expeditions is how plankton food webs in different areas of the oceans function under different environmental conditions in order to understand the “rules” of why systems vary and how they respond to change. Our hope in this project is to apply the techniques that we have developed and the results from past experiences to characterize the unique aspects of the Gulf of Mexico habitat that lead to rapid growth and success of larval bluefin tuna (why do momma tunas migrate vast distances to spawn in only few small places in the ocean?) so that fisheries scientists might be better able to predict how they might be affected by future ocean changes.

Above: Groups of water bottles to
be sent to different depths
Below: Our filtration set up -
6 bottles at once!
"In this project, we are taking two approaches to studying food-web relationship and rates. One is experimental, involving direct measurements of community composition, productivity and nutrient uptake by phytoplankton, the microscopic plants of the sea. We also measure the consumption (grazing) of phytoplankton by zooplankton, the slightly larger but still pretty small protozoa and small animals that comprise the first 2-3 steps of the ocean food web. This is the “what is there,” "what are they doing,” and “how fast are they doing it” part of the study. Phytoplankton often go through one or two generations (cell divisions) per day, and they get eaten almost as fast as as they divide, so the tricky part of these experiments is separating the two rates (production growth and grazing loss) that are going on at the same time. We have a technique for this, which involves dilution of the grazing impact (using filtered water, changing the encounter frequency of predators and prey) in some of our experimental bottles. It is also important that we run our experiments under natural conditions of underwater light and temperature, so all of our experimental bottles that contain the plankton that we collected at different depths are put in net bags and attached at same depth to a line underneath a free-floating drifter float that we track by satellite for a day before picking up and exchanging bottles for a new batch of experiments. After a lot of filtering, preservation or freezing, and later analysis in our lab on shore, we should have a pretty good picture of how productivity and nutrients are moving through various routes in the food web to get to the specific zooplankton prey that bluefin tuna larvae like to eat.

Tom (L) and Mike (R) attach bottles to the sediment trap array

Mike (L) and Aki (R) hunt for BFT using microscopes onboard
"In the second approach to this study, we will use the tuna larvae themselves to tell us where they reside in the food web and what is the main source of nutrients (nitrogen) for primary production. This information resides in the nitrogen isotopic composition of the amino acids that make up the proteins of the tuna larva muscle tissue, which varies with the source of nitrogen (N2 gas for nitrogen fixation versus nitrate from deep water upwelling) and the number of predator-prey steps that the nitrogen has taken to get to the larvae, starting from phytoplankton. This sounds complicated, but the isotope analysis is easier to do than all of the experiments that are needed to assemble the food-web picture. One of our goals is to see if results from these two approaches agree, which has never been done before for any system because the isotope approach is so new. If this works out, it would validate using the isotopes in future studies, or also to look at changes in food-web structure and nitrogen sources that may have already occurred with climate change, using the muscle tissues of fish samples that have been taken in the past and preserved in museum collections."

Tuesday, May 30, 2017

Featured Scientist: Tom Kelly

Today we learn about Tom who shares his insights into the infamous sediment trap! Here is his blog post. (Read previous guest posts here!)

Tom and the incubation system
My name is Thomas Kelly and I am a PhD Candidate at Florida State University in the Plankton Ecology and Biogeochemistry Lab. One of the principal tools that I use in my research is called a sediment trap. A sediment trap collects marine particles and organisms as they sink through the water column. You can think of a sediment trap as an underwater rain gauge that collects sinking plankton instead of falling rain drops.

Since most of the biological growth occurs where light is plentiful (i.e. photosynthesis), the majority of marine organisms live within the surface layers of the oceans. But as these organisms die, get broken up, or defecate, particles settle out of the surface layer and into the deeper ocean. Our sediment traps are placed in between these layers and can tell us about what kind and how quickly carbon, nutrients, and other material leaves the surface ecosystem.
Tom and Mike deploy the sediment trap












The deployment of the sediment trap is really quite straightforward and will typically take a bit over an hour. The whole assembly consists of a long rope that extends from the surface all the way down to the depth of the last sediment trap frame (Pictured to the left), about 650 (210m) feet. At the bottom we place 60 lbs (27 kg) of weights and at the top a set of buoys. For the Bluefin Tuna Cruise the sediment trap frames are placed at approximately 150, 400, and 600ft (50, 120, and 200m) of water depth so that we can measure how the sinking of particles changes with depth.

Onto the frame we attach a set of tubes filled with extra salty seawater so that any particles that sink into them will stay in the tube rather than being mixed out again (the denser fluid will stay inside the tube just like a glass of water will stay inside a cup). Besides that, the tubes are also spiked with formaldehyde to kill anything that tries to eat the sinking material and a baffle at the top to reduce turbulence around the top of the tube.

Tom plots his next filtration experiment
After 3-5 days of drifting, the sediment trap is ready to come aboard and be processed. In general, each of the sampling tubes is filtered and frozen for later processing on land where we can look at such things as the carbon and nitrogen content. Some of the specialized aspects that we can look at from the sediment traps include the size classes of the particles collected, the source of the material collected, and the quantity of various metals and nutrients within the material. Ultimately the sediment trap provides invaluable information about how the ecosystem looses energy and material to the deeper water column.

Sunday, May 28, 2017

Outreach & Education: Nancy Opens her doors during our Progreso Open House


The ship Nancy Foster arrived for the first time to Progreso in Yucatán on May 19. On Saturday, May 20, we held an Open House event to explain the scientific research activities we carried out in the Gulf of Mexico. On this occasion we were accompanied by Dr. Mario González Espinosa, Director of ECOSUR, Dr. Magda Estela Domínguez Machín, Assistant Director of Fisheries Resources in the Atlantic of INAPESCA, Dr. Josefina del Carmen Santos Valencia, Chief of CRIP Yucalpetén, and Dr. Alvaro Hernández Flores, Professor-Researcher at MARISTA University, together with Doctorate students in Fisheries and Aquaculture Bioeconomics at the university. The students of Marine Biology (UADY), led by Dr. Alfonso Aguilar Perera, Professor-Researcher of UADY Marine Biology Faculty, were present as well as Mr. Manuel Sánchez González, President of the Yucatán Shipowners Union.

Mike Stukel explains the sediment traps to local fishers
Student explores plankton in the microscope!
While everyone explored the ship, scientists explained the main activities carried out during our campaign in the different laboratories. In the “wetlab,” everyone got an opportunity to see the many organisms that make up the plankton using microscopes. 

The wetlab is also where each sample is carefully examined to search for tuna larvae and multiple filtrations of seawater take place. In the “dry lab” all the controls for deployment and recovery of of equipment take place. On the back deck, we saw the equipment used to ascertain nitrogen sources in relation to the plankton food-web dynamics in the habitats of the BFT. 

Scientists examine specimens under the microscope
Chief Sci Estrella Malca discusses the project goals
This is novel and exciting because, despite its importance, these research activities are being conducted for the first time in the Gulf of Mexico! Finally, on the bridge, the NOAA Corps officers showed us the state of the art navigation equipment and instruments utilized to safely and accurately lead the ship to and from our sampling locations.

Mexico and US collaborators
Students and researchers asked questions about our various activities and were surprised by the great diversity of organisms observed in the microscope and those captured on the computer screen during this survey. We would like to thank everyone for participating and to all of the port agents, the scientists, crew and officers for making this a fun and well organized event!

Thursday, May 25, 2017

Featured Scientist: Meet Jennifer!

Today's featured scientist is a recent graduate from University of California - San Diego, Jennifer Beatty! She is a research assistant at the Scripps Institution of Oceanography. Read on to find out her goals for this survey in her own words!


Jennifer fixes a sample collected in the GOM
"The lab I'm involved with studies the interaction of phytoplankton and zooplankton, which are the lowest levels of marine food webs. Phytoplankton are essentially the plants of the sea, while zooplankton are the animal plankton that eat them. The way these two interact changes in different parts of the ocean, which impacts the dynamics of organisms further up the food web, including bluefin tuna larvae! During this cruise, we are hoping to get an idea of what is happening at these lower food web levels to illuminate what conditions are optimal for larval bluefin tuna.


Processing the ring net in the wetlab
"My primary goal for this cruise is to gain field experience at sea. I've worked with samples in the lab, but I wanted to see where they come from and how they are collected. Additionally, I wanted to taste what research at sea is like because I plan to pursue a graduate degree in marine science. Before I head there, I'd like to have a better idea if I prefer research dependent on field work or prefer to stay in the lab."

Tuesday, May 23, 2017

Featured Scientist: Meet Mike!

This year's voyage is the first of two annual research surveys in the Gulf of Mexico for the NOAA RESTORE Act Science Program. Our project, "Research, observation, and monitoring to support long-term sustainability in the GoM ecosystem, including fish stocks, fish habitat, and fishing industries," is in collaboration with some new partners to the FORCES Lab. Read on and get introduced to the project's PI from Florida State University, Mike Stukel!

Mike prepares sample bottles to be loaded into the sediment trap
My name is Mike Stukel, and I am an assistant professor at Florida State University. I am a plankton ecologist and biogeochemist in the FSU Plankton Ecology and Biochemistry Lab. I study the role that some of the smallest organisms in the ocean play in the global carbon cycle and their role in removing carbon dioxide from the atmosphere. On this cruise, I am studying the role that different nutrients play in limiting the primary production of phytoplankton. These tiny algae are responsible for half of the world’s photosynthesis and half of the oxygen that you breathe. Their photosynthesis also supports the entire marine ecosystem of the open ocean Gulf of Mexico. One of my goals in this project is to quantify the food web pathways that partition this phytoplankton production between either the biological pump (which transports atmospheric CO2 into the deep ocean where it can be stored for centuries) or higher trophic levels including larval tuna. 

Mike and Tom (R) with their double-decker water filtrations!
My goal for this cruise is to understand the base of the food web that supports larval tuna.  In particular, I am interested in whether the algae responsible for photosynthesis are ultimately getting their nutrients from upwelling that brings nutrient-rich deep water into the sunlit surface zone or whether special phytoplankton (called Nitrogen-fixers) are creating their own nutrients from the nitrogen gas that is abundant in the atmosphere and ocean.  Answering this question is important to understanding whether or not total productivity in the Gulf of Mexico will decrease due to climate change.

Mike deploys the drifter array in the wee hours of the morning


Monday, May 15, 2017

Featured Scientist: Meet Sydney!

Meet Sydney, who has been an undergraduate student intern at the SEFSC FORCES Lab since Fall 2016! Read about her goals for her first research cruise in her own words...

Sydney models our safety gear
My name is Sydney Harned and I'm a junior at the University of Miami. My goal for this cruise is to learn as much as I can! 

This is my first research cruise, so I'm here to gain some real world experience in the marine biology field. It's been really neat to see scientists specializing in different research areas coming together to work on a project together. 
Sydney is a pro at running the Bongo net!
Since I'm still an undergrad I don't have a specific research focus yet, but I'm hoping to pursue marine genetics in graduate school. For my senior thesis, I'll be using genetics to determine presence/absence of Bluefin Tuna eggs at different stations in the Gulf of Mexico from a previous cruise!


Friday, May 12, 2017

Return of the Tuna!

And....we're back! Back in the Gulf of Mexico (GoM), on the hunt for larval bluefin tuna (BFT)! The next two legs of our survey will be focused on finding patches of bluefin larvae (Thunnus thynnus), and studying the biogeochemical habitat in which we find them. We are joined by some familiar collaborators from the University of Miami-RSMAS, El Colegio de la Frontera Sur (ECOSUR), and the Spanish Institute of Oceanography (IEO), as well as some new team members!

A glimpse of some of the new equipment we'll be using!
Why is this important? Well, you may know that BFT are one of the mostly highly sought after fish in the commercial industry, as they are large, delicious, and highly valuable. But this also means that they are being over exploited - which means that the levels at which they are currently fished are not sustainable long-term. Atlantic BFT are highly migratory species (HMS), distributed throughout the northern Atlantic Ocean. However, they migrate south to the GoM and the Mediterranean Sea to spawn only once a year during the summer months.

The FORCES lab studies the early life stages of tunas in order to tell their "origin story." Why do the adults travel miles and miles to this specific area? Are there certain oceanic features that provide a protective nursery habitat for the larvae and increase their chances for survival? Are there certain biochemical gradients in these waters that help the larvae grow faster or more fit for surviving the pelagic environment? How will forecasted changes in this environment affect larvae in the coming decades?

LOTS of water filtration will be involved!
We are incredibly excited to be embarking upon a brand new set of surveys with several new partners in order to start to answer some of these questions.  We even more thrilled that our new research team was selected as one of the few projects funded by the NOAA RESTORE Act Science Program! This Science Program funds "research, observation, and monitoring to support long-term sustainability in the GoM ecosystem, including fish stocks, fish habitat, and fishing industries" (for more on the program, click here). The FORCES Lab at the NOAA Southeast Fisheries Science Center teamed up with Scripps Institute of Oceanography, Florida State University, and the University of Hawaii at Manoa to examine the "Effects of nitrogen sources and plankton food web dynamics on habitat quality for larval BFT."  Together, we will use net tows, satellite data, oceanographic models, and drifters, to find patches of bluefin tuna larvae in the GoM and then we will follow these patches over the next few days. Every day we will sample (around the clock!) the in situ conditions and characteristics of the patch, in order to obtain a bottom-up understanding of BFT recruitment in the GoM. We will share with you more as we keep drifting with the tunas!

We can't wait to share this new journey with you!

Don't worry, we'll still show you loads of sunsets at sea



Friday, June 17, 2016

Featured Scientists: LaTreese Denson and Sennai Habtes!

Today we'd like to introduce you to two collaborators that we've had the pleasure of working with for many years, LaTreese Denson and Sennai Habtes! 

LaTreese first teamed up with the FORCES lab in the summer of 2009 when she completed her Hollings Scholar internship in Miami. We were thrilled when she returned to Miami last year to start her PhD at the UM Rosenstiel School for Marine and Atmospheric Science (RSMAS), funded by the NOAA LMRCSC Fellowship! 
LaTreese shared with us about herself: "Since this is my first year, I currently take classes and experiment with data (e.g., fish abundance, environmental indices, etc ) and different population estimation models to help figure out what I will be using for my dissertation. At this point I basically sit inside all day and read. On the cruise, I am hoping to get more experience with data collection methods for the ecology of larval fish so that I have a better understanding of the quality of the data that is available for my population models. I also just want to be outside/at-sea.

Her research: "I am interested in modeling fish populations and the effect oceanography may have on their dynamics. Modeling fish populations and estimating their abundance is like putting together one of those insane 1000 piece puzzles with a three year old. The pieces might be everywhere or even missing, there is probably a lot of jamming of miss match pieces together and you won't finish it as soon as you thought but eventually you get close to putting the edges of the puzzle together. In the end its great because even those small steps are huge when you consider the magnitude of the problem."

We love LaTreese's passion and curiosity for marine science! Be sure to check out her personal blog as well, where she's currently sharing her own experiences on the Nancy Foster!

Dr. Sennai Habtes has been an honorary member of the FORCES lab since 2009 when he participated in the Spring SEAMAP plankton survey, and then throughout his PhD studies on larval bluefin tuna. He is now an Assistant Research Professor of Biological Oceanography at the Center for Marine and Environmental Studies (CMES) at the University of the Virgin Islands (UVI).

Read more about Sennai's research! "As a professor at UVI, my time is split evenly between research, teaching, and running the Coastal Oceanography lab for UVI-CMES. My research falls primarily within the fields of fisheries oceanography and zooplankton ecology and is focused on using time series data to study patterns in, and impacts to marine organisms in tropical and subtropical regions. This often requires the development and analysis of data products from satellite, airborne and in-situ oceanographic sensors to understand large marine ecosystems at synoptic spatial and longer temporal scales. Here at UVI I am interested in studying the physical processes and environmental variability in coastal and pelagic ecosystems surrounding the Virgin Islands and Puerto Rico, and to determine how these factors affect the abundance and distribution of marine organisms. In particular I am interested in larval fish and zooplankton, which are important life stages for most commercial and recreational fisheries. This information can be used to develop better tools for ecosystem based management and fisheries decision support systems. The Coastal Oceanography Lab or “Ocean Lab,”  is involved in a range of oceanographic research activities surrounding the USVI, including management of two coastal ocean buoy systems which are part of the CARICOOS buoy network, deployment and recovery for a host of oceanographic sensors used in conjunction with marine research for the Virgin Islands Experimental Program to Stimulate Competitive Research (VI-EPSCoR), and a time-series of zooplankton and oceanographic data used as part of an ecosystem analysis project within Brewers Bay, on St. Thomas. In addition I teach courses on Ecological Research Methods for the Masters for Marine and Environmental Studies program at UVI and a course in oceanography for the undergraduate BS/BA programs in Marine Biology and Environmental Sciences for UVI."

Goals for this cruise: "Beyond simply getting to interact with the cool and amazing scientists in the FORCES lab at NOAA SEFSC and Physical Oceanography Division at NOAA AOML, I am collecting zooplankton in conjunction with the surveys on larval reef fish to understand how oceanographic conditions affect patterns in zooplankton abundance, distribution, and community composition. In addition this data can be used to understand over time if there are changes in Caribbean zooplankton communities and to asses how this may impact larval fish habitat suitability and survival."
Sennai is excited for the waterspout that came near the ship!

We are grateful for the time we've had with LaTreese and Sennai, and look forward to collaborating with them for many years to come!

Monday, June 13, 2016

Leg 2 Wrap Up!

"Leg 3" of the survey has officially started! Nancy, as we affectionately call the ship, departed from St. Thomas and is currently sampling in and around the US and British Virgin Islands as well as Puerto Rico for the next couple of weeks to continue our larval reef fish monitoring in the area (EST 2007-2011, 2013 and 2015!). The focus of this survey is quite different than the previous month (chasing eddies, lobsters and tunas!) and we will continue to share our journey along the way.

So to wrap up the first portion (NF1602), our Legs 1 and 2 chief scientist shared some of her thoughts:

John, our SEFSC Principle Investigator (PI) on the back deck
Evidence of our very international sci-crew
"The past month aboard the NOAA Ship Nancy Foster has been compiled with unforgettable moments! After many years of trying to have a port visit with our neighbor country (Cuba), we successfully docked in La Habana as well as in Cienfuegos!! As marine scientists, we are often ultra-focused on the science, but often the social angle gets lost in the mountains of paperwork we have to navigate to accomplish our research. Our trip to Cuba was possible thanks to many many people in the University, as well as multiple people in both of our governmental institutions - each doing their part to inch our collaborations forward. Our blog portrays the most fun aspect of going to sea, but just to set foot on the ship, A LOT happens behind the scenes!

"So without much further ado, THANK YOU to all that made the month of MAY possible! If you are one of those people reading the blog (you know who you are), we truly appreciate your efforts and hope you enjoyed the blog so far!"

We have some May photos for your enjoyment... stay tuned for most of June as Nancy returns to the eastern Caribbean!!


Miami-Cozumel (Leg 1)
L-R: Ofelia, Lulu, John, Yoandry, Raul, Aki, Grant, Jason, Matthieu, Leif, Atsushi
Front: Sarah and Estrella


Cozumel-Cienfuegos (Leg 2)
L-R: Estrella, John, Trika, David, Aki, Leif, Cati, Ofelia, Jason, Ryan
Front: Raul, Yoandry
Yoandry, Grant, Lulu, and Raul pose during a station on the back deck
Selfie!! Leg 1 scientists on the back deck at the end of the leg.
Cati, Ofelia, Raul, and Aki take in the view from the bridge deck as the ship pulls into Cienfuegos, Cuba.
L-R: John, Raul, Jason, David, Leif, Ryan, Aki, Trika, Cati, Ofelia, and Estrella in Cienfuegos.

Monday, May 16, 2016

Finding the Features

A Battle on Many Fronts


Where is the best place to catch fish? Alas, a question that plagues not only the fisherman, but the fisheries oceanographer as well. Ocean conditions and transport mechanisms play a vital role in the lives of the fish (and other creatures) that dwell there. Hours after spawning, ocean currents are sweeping fertilized fish eggs away from their spawning location. If the temperature is just right, the eggs hatch into larval fish where ocean features such as eddies will ultimately determine if the fish will find its favorite food and grow into an adult.

How do we find these ever-changing phenomena so we can study the effect they have on larval fish? Well...we have some tools.

Satellites


You may find it strange that we use satellites orbiting hundreds of miles above the Earth to find habitat for larval fish that can only be examined under a microscope, but it’s true! From the deck of a ship, one patch of blue water often looks like the next, which is why we call on instruments such as the Advanced Very High Resolution Radiometer (AVHRR) to do our sensing. A radiometer is a high-tech piece of equipment mounted on an orbiting satellite that detects radiation which can be used for remotely determining cloud cover, or, in our case, sea surface temperatures. Our collaborators at Roffer’s Ocean Fishing Forecasting Services, Inc. (ROFFSTM) analyze the satellite data to provide us with a picture of where the boundaries between distinct water masses (“fronts”) are. The color image below makes it easy to see the fronts differentiated by surface temperature. 

Satellite image and analysis analysis from ROFFS showing sea surface temperature (SST), currents (blue arrows), completed/planned stations (pink Xs) and future possible sampling locations (red Xs)
We know certain species such as Atlantic bluefin tuna often spawn near fronts, so this helps us in determining where the best areas to sample for larvae are. But satellites have their limitations. Despite the Caribbean’s reputation for sunny beaches, the clouds do occasionally roll in and prevent the satellites from “seeing” the ocean surface.

Circulation Models


While satellites provide accurate, near-real time information, sometimes it is useful to get an estimate of what the future holds. Ocean general circulation models such as the Hybrid Coordinate Ocean Model (HYCOM) use environmental inputs and complex mathematical formulas to produce predictions of ocean parameters such as Sea Surface Temperature (SST) and the speed and direction of ocean currents. 

HYCOM model output for sea surface temperature (degrees Celsius)
HYCOM model output for ocean currents (arrows show direction, colors show speed in cm/second)
While the model is not a perfect predictor, it proves useful on cloudy days or when you want to do some advance planning which is almost always necessary on a ship that has a maximum speed of 10.5 knots (~12 mph).

Ship Data


Having the support of satellites endlessly gathering data and computers constantly running models are great assets to what we do…but so is having access to a high-tech research vessel! Flow through sensors show real-time sea surface temperature and salinity as the ship is sailing and echo sounders are pinging the bottom and displaying a precise depth. But perhaps the most important tool aboard to detect frontal zones is the Acoustic Doppler Current Profiler, also known as the ADCP.  

ADCP output from the 2015 survey across the Yucatan Channel. The ship's track is in black with the direction and size of the arrows showing the direction and speed of the current. Color indicates SST.
The ADCP uses sound waves and the Doppler Effect to measure how fast water is moving in the water column. What does all this jargon mean? It means that we can detect the speed and direction of the current directly below the ship…while the ship is moving! So once we consult the satellite images and model outputs, the ADCP confirms that we have arrived at the right spot. Then it is time to tow some nets…

Saturday, May 14, 2016

Let's get Sampling!

North of Havana, Cuba, the sampling is officially underway! 

One goal of this first leg is to better understand the oceanography around Cuba, especially the northern and western regions. For hydrographic modelers in the U.S. working in the Gulf of Mexico and Straits of Florida, this region is of great interest since access to empirical data from around Cuba has been lacking and these waters are tightly connected to surrounding U.S. waters. One way to visualize this connectivity is through the deployment of satellite-tracked surface drifting buoys ("drifters"). Like a high-tech message in a bottle, the drifter floats along with ocean currents periodically communicating its position and other data such as temperature to passing satellites.


Research Associate Akihiro Shiroza deploys a drifter off of the Nancy Foster in 2015

The image below shows the paths of some drifters deployed off of the Yucatan in Mexico in 2006. As you can see, not all of them ended up in the same place. Some ended up in the Gulf of Mexico, one returned to the Caribbean south of Cuba and the other ended up in the Atlantic following the Gulf Stream! This illustrates how fish spawned in similar areas can end up very far from each other.


Drifter trajectories from a larval study in 2006. Each color represents one drifter. Open circles are start points and stars are end points.
Over the first week of sampling we were able to collect lots of physical data - information about currents, temperature, and salinity - as well as biological samples. These biological, or plankton, samples included tuna larvae and possibly even a couple of bluefin tuna larvae (though, of course, we need to confirm these identifications with genetics once we return to the lab!). These physical and biological data were collected from areas of upwelling to the west of Havana and on the eastern end of Guanahacabibes Peninsula (western-most point of Cuba) and also from a mesoscale eddy located on the western side of the Loop Current.

Plankton collected on NF-16-02. From top left to bottom right: Amphipod, larval anglerfish (Ceratioidei), larval blackfin tunas (Thunnus atlanticus), larval squid, larval lobster, larval lionfish (Pterois volitans)

Areas of upwelling are very important for life in the ocean as the deeper waters that are flowing up to the surface bring with them lots of nutrients. Once these nutrients reach a depth where sunlight can penetrate, they are taken up by phytoplankton to help them grow and reproduce and, thus, primary productivity is increased. These areas of increased productivity are great for zooplankters that eat the phytoplankton. And, in turn, as zooplankton (such as copepods) grow and reproduce, these areas become great for larval fish that each the copepods. Those increases in nutrients move right up the food chain! 

Collecting plankton is hard work! Top: Ofelia, Atsushi, and Aki rinse down the net. Middle: Lulu and Raul prepare the sample for sorting by rinsing out the cod end (grey PVC with holes). Bottom: Lulu and Estrella diligently sort through the plankton, pulling out any fish species of interest.

Mesoscale eddies are also significant oceanographic features for very similar reasons. The dynamic flow patterns associated with eddies include areas of upwelling. In addition to the upwelling, the recirculating nature of the eddy currents can sometimes retain weak-swimming plankton within the eddy feature, and, therefore, near those areas of increased productivity. Mesoscale eddies are found throughout all of the world’s oceans and since the advent of satellite techniques that allow us to observe the ocean over large spatial and temporal scales scientists have begun to recognize that eddies may be critical to much life in the ocean. Our work on eddies on this cruise has just begun……stay tuned for much more in depth sampling of mesoscale eddies on leg 2!

Thursday, May 12, 2016

The FORCES Awaken

NOAA Ship Nancy Foster alongside in Havana, Cuba
The Nancy Foster is underway once again with an eager compliment of scientists ready to comb the Caribbean for plankton! As with last year the Southeast Fisheries Science Center (SEFSC) is partnering with the Atlantic Oceanographic and Meteorological Laboratory (AOML) to tackle this year’s scientific objectives.

The first part of the 2016 survey (NF-16-02) will be working in waters around western Cuba and east of the Yucatan Peninsula. The focus of this part of the survey will be to continue our study of the distribution and abundance of Atlantic bluefin tuna (ABT) and other tuna larvae in the Gulf of Mexico and western Caribbean Sea. In addition to tuna larvae, the 2016 survey will sample other larval species found near regional coastal reefs including snapper, grouper, parrotfish, and spiny lobster larvae. The goal is to understand the role that the major current systems play in the dispersal/retention of these species and identify possible spawning locations, examine growth and survival of larvae, and increase our understanding of species recruitment to benthic habitat.

The second part of the 2016 survey (NF-16-03) will take place in the vicinity of the Virgin Islands (VI). During this part of the survey, we plan on sampling water properties, currents, and dispersal and transport of fish larvae in the VI and neighboring regions. Results from the survey can enhance our understanding of regional spatial variation in the supply of fish larvae between managed and non-managed areas.

The mighty Neuston net soars again
While the research area and sampling methods may seem similar to last year’s project, we can assure you, our loyal reader, that new and exciting things are in store for 2016! One major change that happened since last year is a rebranding of the very lab that brings you this blog. Say goodbye to the SEFSC’s Early Life History (ELH) Lab and hello to the Fisheries Oceanography for Recruitment, Climate, and Ecosystem Studies (FORCES) Lab! During its humble beginnings, the ELH lab was focused on larval fish taxonomy (i.e. the description and classification of larval fishes) but in the years that followed our work has expanded to a point where now we use tools such as biophysical models, genetics, and isotope analysis to look at the role larval fish and plankton play in the ocean ecosystem in an effort to protect and manage our valuable ocean resources.

The first days of any cruise are indeed hectic as the science party begins to regain their sea legs and shake the rust off. As we put our first nets in the water and deploy our inaugural CTDs north of Havana, Cuba, here is a recap of what the Foster has been up to since we embarked in Miami.

Castillo de los Tres Reyes Magos del Morro
NOAA Ship Nancy Foster arrived at the U.S. Coast Guard Base Miami Beach on May 2nd, at which point the controlled chaos began. Scientists and crew worked like ants to load all of the necessary equipment and supplies for almost two months at sea; nets, frames, CTDs, hundreds of sample jars, drums of ethanol, drifters, microscopes, computers, liquid nitrogen, fuel, FOOD! Members of the science party flew in from all corners of the world; Mexico, Spain, Japan… Last-minute generator repairs completed…Amongst the chaos we also managed to host a 6th grade class for a field trip aboard the vessel. Somehow, everything got done and on May 7th, lines were tossed and NF-16-02 and the Nancy Foster were underway! Next stop: Havana.

The day long transit to Havana gave us some time to catch up with each other, (re)familiarize ourselves with the ship, and discuss the upcoming sampling plan. We also took this time to test all of our science equipment. We stopped to deploy our nets and CTD to make sure all of the electronics were functioning properly and went over deployment and recovery procedures (it is a true group effort!).

A Havana icon
The Nancy Foster arrived in Havana on May 8th to embark the last two members of our science party. The crew and science party enjoyed the prestige of being one of the first U.S. Government vessels to pull in to Havana in a very long time. For more pictures and information on the Nancy Foster's visit to Cuba click here, or here.  With our Cuban colleagues aboard, the Foster left Havana on May 10th en route to station 001.  Although the weather was less than ideal, we were hoping that our excitement to get the survey started would soothe our seasickness (but if that doesn’t work, there is always sea sickness medication).


Stay tuned as our exciting 2016 survey unfolds. If this is your first Nancy Foster Chronicle, feel free to browse previous years’ blogs to get an idea of what we are all about!

Clyde keeps a watchful eye on the ship